Server Command Line Parameters
- -port <portnumber>
- The port where the sever listenes for Ridom Typer clients.
- Default:
8064
- -workingdir <directory>
- The path where the server stores configuration and logging files, and by default the database files,
- Default:
/home/<user>/.ridomtyper-server(Linux),C:\Users\<user>\ridomtyper-server(Windows), orC:\ridomtyperdata(Windows, installed as Service)
- -tempdir <directory>
- The path where the server stores temporary files files.
- Default: Temporary folder of the system
- -gui
- If set, the server application shows a tray icon in the task bar and starting up/shutting down dialogs.
- -restoreLastBackup
- Restores the most current backup from the configured backup directory, then exits the program.
- (The current database will be moved to a sub directory named oldContent.)
- -restoreBackup <file>
- Restores the given backup file, then exits the program.
- (The current database will be moved to a sub directory named oldContent.)
- -update [<file>]
- Allows to install software updates on the text console without a graphical user interface. If no file parameter is given, the update is searched and downloaded from www.ridom.de.
Important: It is recommended to use ridomtyperserver.sh as executable. If ridomtyperserver is used, the current directory must be the installation directory.
Client Command Line Parameters
- -pipeline
- Starts the Ridom Typer client in Pipeline Mode for import of NGS data.
- -listpipelines
- Prints a list of all existing pipeline scripts and numbers on the console.
- -pipeline <number>
- Starts a pipeline defined by the pipeline script with the given number(s). Multiple numbers can be given comma separated, or as range (e.g., "1-5,7").
- -spawn <number>
- Starts multiple instances of the Ridom Typer client. Useful in combination with -pipeline <number> for starting parallel running pipelines on high performance computers.
- -t <number>
- Maximum number of threads that should be used in the pipeline.
- -sysinfo
- Display system information.
- -syscheck
- Run a self check of the Ridom Typer installation.
- -configure-proxy
- Configure a proxy server if required for Internet connection.
- -install-tools
- Install required bioinformatic tools in micromamba.
- -update [<file>]
- Allows to install software updates on the text console without a graphical user interface. If no file parameter is given, the update is searched and downloaded from www.ridom.de.
- -profiledir <directory>
- The path where Ridom Typer stores the configuration and logging files.
- Default:
ridomtyper(on Windows) or.ridomtyper(on Linux) in user's home directory
- -tempdir <directory>
- Define temporary directory. Default: system temporary directory
- -log-to-console
- Print all loggings also to system console
- -gui
- Explicitly define to start with GUI
- -nogui
- Explicitly define to start without GUI
Important: It is recommended to use ridomtyper.sh as executable. If ridomtyper is used, the current directory must be the installation directory.